EPHA7

Protein-coding gene in the species Homo sapiens
EPHA7
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2REI, 3DKO, 3H8M, 3NRU

Identifiers
AliasesEPHA7, EHK-3, EHK3, EK11, HEK11, EPH receptor A7
External IDsOMIM: 602190 MGI: 95276 HomoloGene: 20935 GeneCards: EPHA7
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)[1]
Chromosome 6 (human)
Genomic location for EPHA7
Genomic location for EPHA7
Band6q16.1Start93,240,020 bp[1]
End93,419,559 bp[1]
Gene location (Mouse)
Chromosome 4 (mouse)
Chr.Chromosome 4 (mouse)[2]
Chromosome 4 (mouse)
Genomic location for EPHA7
Genomic location for EPHA7
Band4 A4|4 12.42 cMStart28,813,131 bp[2]
End28,967,499 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • endothelial cell

  • Brodmann area 23

  • middle temporal gyrus

  • ganglionic eminence

  • caput epididymis

  • gastric mucosa

  • Achilles tendon

  • urinary bladder

  • cerebellar cortex

  • cerebellar hemisphere
Top expressed in
  • dentate gyrus

  • Region I of hippocampus proper

  • hippocampus proper

  • atrioventricular valve

  • habenula

  • atrium

  • trigeminal ganglion

  • maxillary prominence

  • cingulate gyrus

  • saccule
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • transferase activity
  • nucleotide binding
  • protein kinase activity
  • GPI-linked ephrin receptor activity
  • ephrin receptor binding
  • kinase activity
  • protein binding
  • transmembrane receptor protein tyrosine kinase activity
  • protein tyrosine kinase activity
  • ATP binding
  • axon guidance receptor activity
  • ephrin receptor activity
  • chemorepellent activity
  • receptor tyrosine kinase
  • transmembrane signaling receptor activity
  • transmembrane-ephrin receptor activity
Cellular component
  • integral component of membrane
  • postsynaptic membrane
  • membrane
  • neuromuscular junction
  • plasma membrane
  • integral component of plasma membrane
  • neuronal cell body
  • dendrite
  • Schaffer collateral - CA1 synapse
  • hippocampal mossy fiber to CA3 synapse
  • glutamatergic synapse
  • integral component of postsynaptic specialization membrane
  • integral component of postsynaptic density membrane
  • cytoplasm
  • neuron projection
  • receptor complex
Biological process
  • apoptotic process
  • positive regulation of protein phosphorylation
  • regulation of protein autophosphorylation
  • phosphorylation
  • transmembrane receptor protein tyrosine kinase signaling pathway
  • ephrin receptor signaling pathway
  • negative regulation of synapse assembly
  • regulation of cysteine-type endopeptidase activity involved in apoptotic process
  • nervous system development
  • branching morphogenesis of a nerve
  • multicellular organism development
  • protein phosphorylation
  • negative regulation of collateral sprouting
  • positive regulation of neuron apoptotic process
  • brain development
  • nephric duct morphogenesis
  • regulation of cell-cell adhesion
  • regulation of ERK1 and ERK2 cascade
  • positive regulation of apoptotic process
  • peptidyl-tyrosine phosphorylation
  • regulation of peptidyl-tyrosine phosphorylation
  • retinal ganglion cell axon guidance
  • negative chemotaxis
  • regulation of postsynapse organization
  • negative regulation of signal transduction
  • cell differentiation
  • negative regulation of apoptotic process
  • positive regulation of ERK1 and ERK2 cascade
  • axon guidance
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2045

13841

Ensembl

ENSG00000135333

ENSMUSG00000028289

UniProt

Q15375

Q61772

RefSeq (mRNA)

NM_001288629
NM_001288630
NM_004440

NM_001122889
NM_001290434
NM_010141

RefSeq (protein)
NP_001275558
NP_001275559
NP_004431
NP_001363394
NP_001363395

NP_001363396
NP_001363397
NP_001363398
NP_001363399
NP_001363400

NP_001116361
NP_001277363
NP_034271

Location (UCSC)Chr 6: 93.24 – 93.42 MbChr 4: 28.81 – 28.97 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Ephrin type-A receptor 7 is a protein that in humans is encoded by the EPHA7 gene.[5][6]

This gene belongs to the ephrin receptor subfamily of the protein-tyrosine kinase family. EPH and EPH-related receptors have been implicated in mediating developmental events, particularly in the nervous system. Receptors in the EPH subfamily typically have a single kinase domain and an extracellular region containing a Cys-rich domain and 2 fibronectin type III repeats. The ephrin receptors are divided into 2 groups based on the similarity of their extracellular domain sequences and their affinities for binding ephrin-A and ephrin-B ligands.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000135333 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000028289 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Ephnomenclaturecommittee (Sep 1997). "Unified nomenclature for Eph family receptors and their ligands, the ephrins. Eph Nomenclature Committee". Cell. 90 (3): 403–4. doi:10.1016/S0092-8674(00)80500-0. PMID 9267020. S2CID 26773768.
  6. ^ a b "Entrez Gene: EPHA7 EPH receptor A7".

Further reading

  • Flanagan JG, Vanderhaeghen P (1998). "The ephrins and Eph receptors in neural development". Annu. Rev. Neurosci. 21: 309–45. doi:10.1146/annurev.neuro.21.1.309. PMID 9530499.
  • Zhou R (1998). "The Eph family receptors and ligands". Pharmacol. Ther. 77 (3): 151–81. doi:10.1016/S0163-7258(97)00112-5. PMID 9576626.
  • Holder N, Klein R (1999). "Eph receptors and ephrins: effectors of morphogenesis". Development. 126 (10): 2033–44. doi:10.1242/dev.126.10.2033. PMID 10207129.
  • Wilkinson DG (2000). "Eph receptors and ephrins: regulators of guidance and assembly". Int. Rev. Cytol. International Review of Cytology. 196: 177–244. doi:10.1016/S0074-7696(00)96005-4. ISBN 978-0-12-364600-2. PMID 10730216.
  • Xu Q, Mellitzer G, Wilkinson DG (2001). "Roles of Eph receptors and ephrins in segmental patterning". Philos. Trans. R. Soc. Lond. B Biol. Sci. 355 (1399): 993–1002. doi:10.1098/rstb.2000.0635. PMC 1692797. PMID 11128993.
  • Wilkinson DG (2001). "Multiple roles of EPH receptors and ephrins in neural development". Nat. Rev. Neurosci. 2 (3): 155–64. doi:10.1038/35058515. PMID 11256076. S2CID 205014301.
  • Fox GM, Holst PL, Chute HT, et al. (1995). "cDNA cloning and tissue distribution of five human EPH-like receptor protein-tyrosine kinases". Oncogene. 10 (5): 897–905. PMID 7898931.
  • Gale NW, Holland SJ, Valenzuela DM, et al. (1996). "Eph receptors and ligands comprise two major specificity subclasses and are reciprocally compartmentalized during embryogenesis". Neuron. 17 (1): 9–19. doi:10.1016/S0896-6273(00)80276-7. PMID 8755474. S2CID 1075856.
  • Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi:10.1101/gr.6.9.791. PMID 8889548.
  • Ciossek T, Ullrich A (1997). "Identification of Elf-1 and B61 as high affinity ligands for the receptor tyrosine kinase MDK1". Oncogene. 14 (1): 35–43. doi:10.1038/sj.onc.1200800. PMID 9010230. S2CID 24727040.
  • Hock B, Böhme B, Karn T, et al. (1998). "PDZ-domain-mediated interaction of the Eph-related receptor tyrosine kinase EphB3 and the ras-binding protein AF6 depends on the kinase activity of the receptor". Proc. Natl. Acad. Sci. U.S.A. 95 (17): 9779–84. Bibcode:1998PNAS...95.9779H. doi:10.1073/pnas.95.17.9779. PMC 21413. PMID 9707552.
  • Bianchi LM, Liu H (1999). "Comparison of ephrin-A ligand and EphA receptor distribution in the developing inner ear". Anat. Rec. 254 (1): 127–34. doi:10.1002/(SICI)1097-0185(19990101)254:1<127::AID-AR16>3.0.CO;2-Q. PMID 9892426.
  • Janis LS, Cassidy RM, Kromer LF (1999). "Ephrin-A binding and EphA receptor expression delineate the matrix compartment of the striatum". J. Neurosci. 19 (12): 4962–71. doi:10.1523/JNEUROSCI.19-12-04962.1999. PMC 6782661. PMID 10366629.
  • Stubbs J, Palmer A, Vidovic M, Marotte LR (2000). "Graded expression of EphA3 in the retina and ephrin-A2 in the superior colliculus during initial development of coarse topography in the wallaby retinocollicular projection". Eur. J. Neurosci. 12 (10): 3626–36. doi:10.1046/j.1460-9568.2000.00251.x. PMID 11029633. S2CID 37988439.
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