TSPAN3

Protein-coding gene in humans
TSPAN3
Identifiers
AliasesTSPAN3, TM4-A, TM4SF8, TSPAN-3, tetraspanin 3
External IDsOMIM: 613134; MGI: 1928098; HomoloGene: 21168; GeneCards: TSPAN3; OMA:TSPAN3 - orthologs
Gene location (Human)
Chromosome 15 (human)
Chr.Chromosome 15 (human)[1]
Chromosome 15 (human)
Genomic location for TSPAN3
Genomic location for TSPAN3
Band15q24.3Start77,041,404 bp[1]
End77,083,984 bp[1]
Gene location (Mouse)
Chromosome 9 (mouse)
Chr.Chromosome 9 (mouse)[2]
Chromosome 9 (mouse)
Genomic location for TSPAN3
Genomic location for TSPAN3
Band9|9 BStart56,039,009 bp[2]
End56,072,761 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • bronchial epithelial cell

  • mucosa of sigmoid colon

  • ventricular zone

  • rectum

  • corpus epididymis

  • beta cell

  • caput epididymis

  • palpebral conjunctiva

  • right uterine tube

  • external globus pallidus
Top expressed in
  • vestibular sensory epithelium

  • Epithelium of choroid plexus

  • nucleus of stria terminalis

  • central gray substance of midbrain

  • ventral tegmental area

  • right kidney

  • left colon

  • saccule

  • dorsomedial hypothalamic nucleus

  • superior colliculus
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
  • molecular function
Cellular component
  • integral component of membrane
  • integral component of plasma membrane
  • extracellular exosome
  • membrane
Biological process
  • cell surface receptor signaling pathway
  • biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

10099

56434

Ensembl

ENSG00000140391

ENSMUSG00000032324

UniProt

O60637

Q9QY33

RefSeq (mRNA)

NM_198902
NM_001168412
NM_005724

NM_019793

RefSeq (protein)

NP_001161884
NP_005715
NP_944492

NP_062767

Location (UCSC)Chr 15: 77.04 – 77.08 MbChr 9: 56.04 – 56.07 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Tetraspanin-3 is a protein that in humans is encoded by the TSPAN3 gene.[5]

The protein encoded by this gene is a member of the transmembrane 4 superfamily, also known as the tetraspanin family. Most of these members are cell-surface proteins that are characterized by the presence of four hydrophobic domains.

The proteins mediate signal transduction events that play a role in the regulation of cell development, activation, growth and motility. The use of alternate polyadenylation sites has been found for this gene. Two alternative transcripts encoding different isoforms have been described.[5]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000140391 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000032324 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b "Entrez Gene: TSPAN3 tetraspanin 3".

Further reading

  • Berditchevski F (2002). "Complexes of tetraspanins with integrins: more than meets the eye". J. Cell Sci. 114 (Pt 23): 4143–51. doi:10.1242/jcs.114.23.4143. PMID 11739647.
  • Otsuki T, Ota T, Nishikawa T, et al. (2007). "Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries". DNA Res. 12 (2): 117–26. doi:10.1093/dnares/12.2.117. PMID 16303743.
  • Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Todd SC, Doctor VS, Levy S (1998). "Sequences and expression of six new members of the tetraspanin/TM4SF family". Biochim. Biophys. Acta. 1399 (1): 101–4. doi:10.1016/s0167-4781(98)00087-6. PMID 9714763.
  • Wu YJ, Noguchi CT (1991). "Activation of globin gene expression by cDNAs from induced K562 cells. Evidence for involvement of ferritin in globin gene expression". J. Biol. Chem. 266 (26): 17566–72. doi:10.1016/S0021-9258(19)47409-7. PMID 1840594.

External links

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ArrestinMembrane-spanning 4A
  • MS4A1
  • MS4A2
  • MS4A3
  • MS4A4A
  • MS4A4E
  • MS4A5
  • MS4A6A
  • MS4A6E
  • MS4A7
  • MS4A8B
  • MS4A9
  • MS4A10
  • MS4A12
  • MS4A13
  • MS4A14
  • MS4A15
  • MS4A18
MyelinPulmonary surfactantTetraspanin
Other/ungrouped
see also other cell membrane protein disorders


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