CNIH4

Protein-coding gene in the species Homo sapiens
CNIH4
Identifiers
AliasesCNIH4, CNIH-4, HSPC163, cornichon family AMPA receptor auxiliary protein 4, CNIH2
External IDsOMIM: 617483; MGI: 1925828; HomoloGene: 5932; GeneCards: CNIH4; OMA:CNIH4 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for CNIH4
Genomic location for CNIH4
Band1q42.11Start224,356,858 bp[1]
End224,379,459 bp[1]
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)[2]
Chromosome 1 (mouse)
Genomic location for CNIH4
Genomic location for CNIH4
Band1|1 H4Start180,972,258 bp[2]
End180,996,559 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • jejunal mucosa

  • vulva

  • pericardium

  • right ventricle

  • human penis

  • oral cavity

  • biceps brachii

  • gums

  • retinal pigment epithelium

  • trabecular bone
Top expressed in
  • internal carotid artery

  • medial ganglionic eminence

  • duodenum

  • morula

  • jejunum

  • hair follicle

  • external carotid artery

  • epithelium of stomach

  • endocardial cushion

  • digastric muscle
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • protein binding
  • CCR5 chemokine receptor binding
Cellular component
  • integral component of membrane
  • endoplasmic reticulum
  • membrane
  • endoplasmic reticulum-Golgi intermediate compartment
Biological process
  • protein transport
  • endoplasmic reticulum to Golgi vesicle-mediated transport
  • vesicle-mediated transport
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

29097

98417

Ensembl

ENSG00000143771

ENSMUSG00000062169

UniProt

Q9P003

Q9CX13

RefSeq (mRNA)

NM_001277197
NM_001277198
NM_001277199
NM_001277200
NM_014184

NM_030131

RefSeq (protein)

NP_001264126
NP_001264127
NP_001264128
NP_001264129
NP_054903

NP_084407

Location (UCSC)Chr 1: 224.36 – 224.38 MbChr 1: 180.97 – 181 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Protein cornichon homolog 4 is a protein that in humans is encoded by the CNIH4 gene.[5][6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000143771 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000062169 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Zhang QH, Ye M, Wu XY, Ren SX, Zhao M, Zhao CJ, Fu G, Shen Y, Fan HY, Lu G, Zhong M, Xu XR, Han ZG, Zhang JW, Tao J, Huang QH, Zhou J, Hu GX, Gu J, Chen SJ, Chen Z (Nov 2000). "Cloning and Functional Analysis of cDNAs with Open Reading Frames for 300 Previously Undefined Genes Expressed in CD34+ Hematopoietic Stem/Progenitor Cells". Genome Res. 10 (10): 1546–60. doi:10.1101/gr.140200. PMC 310934. PMID 11042152.
  6. ^ "Entrez Gene: CNIH4 cornichon homolog 4 (Drosophila)".

Further reading

  • Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
  • Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
  • Hartley JL, Temple GF, Brasch MA (2001). "DNA Cloning Using In Vitro Site-Specific Recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a Catalog of Human Genes and Proteins: Sequencing and Analysis of 500 Novel Complete Protein Coding Human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  • Simpson JC, Wellenreuther R, Poustka A, et al. (2001). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Rep. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC 1083732. PMID 11256614.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to Biology: A Functional Genomics Pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.
  • Ewing RM, Chu P, Elisma F, et al. (2007). "Large-scale mapping of human protein–protein interactions by mass spectrometry". Mol. Syst. Biol. 3 (1): 89. doi:10.1038/msb4100134. PMC 1847948. PMID 17353931.

External links

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